Gene: Cabp2 ENSRNOG00000018339

Description

calcium binding protein 2 [Source:RGD Symbol;Acc:1563670]

Gene Synonyms

LOC499298, RGD1563670

Location

Primary_assembly 1: 210,804,096-210,809,940 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 253 orthologues, 21 paralogues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000071109.5	Cabp2-201	1084	276aa	ENSRNOP00000065316.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R793	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000143709.1	Cabp2-204	1157	168aa	ENSRNOP00000102604.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HYS5	-
ENSRNOT00000102246.2	Cabp2-203	1034	203aa	ENSRNOP00000082564.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVH6 A6HYS3	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000096614.2	Cabp2-202	875	221aa	ENSRNOP00000086114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A573 A6HYS4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,