Gene: Picalm ENSRNOG00000018322

Description

phosphatidylinositol binding clathrin assembly protein [Source:RGD Symbol;Acc:621054]

Gene Synonyms

Calm, MGC114290, rCALM

Location

Primary_assembly 1: 153,469,202-153,550,237 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 263 orthologues, 1 paralogue and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000084268.3	Picalm-201	3489	686aa	ENSRNOP00000068834.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JTT2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000111120.2	Picalm-204	3513	647aa	ENSRNOP00000082147.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G718 Q498N4	-
ENSRNOT00000092945.3	Picalm-203	3491	678aa	ENSRNOP00000076067.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1B0GWY4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000091470.4	Picalm-202	3384	636aa	ENSRNOP00000069185.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JUQ5	-