Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Btaf1 ENSRNOG00000017938

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Description

B-TFIID TATA-box binding protein associated factor 1 [Source:RGD Symbol;Acc:1564130]

Gene Synonyms

LOC368042, RGD1564130

Location

Primary_assembly 1: 244,065,743-244,156,457 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 204 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000024465.8	Btaf1-201	8366	1855aa	ENSRNOP00000024465.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LW16	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000118235.2	Btaf1-204	8312	1837aa	ENSRNOP00000091184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AB43	-
ENSRNOT00000081786.3	Btaf1-202	8249	1813aa	ENSRNOP00000071913.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K1N4	-
ENSRNOT00000113933.2	Btaf1-203	6247	1848aa	ENSRNOP00000080583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQD2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data