Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Pathway
Molecular interactions
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Gene: Nup133 ENSRNOG00000017919

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Description

nucleoporin 133 [Source:RGD Symbol;Acc:1307827]

Gene Synonyms

LOC292085

Location

Primary_assembly 19: 68,789,065-68,838,692 reverse strand.

GRCr8:CM070409.1

About this gene

This gene has 4 transcripts (splice variants), 205 orthologues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000024182.9	Nup133-201	3658	1154aa	ENSRNOP00000024182.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3Z8B2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000111578.2	Nup133-202	3625	1143aa	ENSRNOP00000088347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A7P7	-
ENSRNOT00000118626.2	Nup133-203	3459	1118aa	ENSRNOP00000088052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A4B0	-
ENSRNOT00000167481.1	Nup133-204	3439	1081aa	ENSRNOP00000110434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data