Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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- Structural variants
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Pathway
Molecular interactions
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Gene: Ccdc172 ENSRNOG00000017656

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Description

coiled-coil domain containing 172 [Source:RGD Symbol;Acc:1359412]

Gene Synonyms

LOC361776

Location

Primary_assembly 1: 267,615,349-267,662,269 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 170 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000161700.1	Ccdc172-204	2250	402aa	ENSRNOP00000101683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000150717.1	Ccdc172-203	2045	310aa	ENSRNOP00000105984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000036012.7	Ccdc172-201	1480	354aa	ENSRNOP00000029328.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AXT4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000091669.3	Ccdc172-202	915	267aa	ENSRNOP00000071660.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R556	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data