Gene: Gja5 ENSRNOG00000017484

Description

gap junction protein, alpha 5 [Source:RGD Symbol;Acc:2692]

Gene Synonyms

Cx40, Cxni

Location

Primary_assembly 2: 187,234,674-187,318,512 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 4 transcripts (splice variants), 254 orthologues, 18 paralogues and is associated with 27 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000023488.8	Gja5-201	2229	398aa	ENSRNOP00000023488.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P28234	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000115241.2	Gja5-203	15032	356aa	ENSRNOP00000080221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K3A5 P28234	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000144780.1	Gja5-204	10940	356aa	ENSRNOP00000111470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K3A5	-
ENSRNOT00000108116.2	Gja5-202	5234	356aa	ENSRNOP00000076921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K3A5 P28234	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,