Gene: Apobr ENSRNOG00000017403

Description

apolipoprotein B receptor [Source:RGD Symbol;Acc:1565169]

Gene Synonyms

Apob48r, LOC499264, RGD1565169

Location

Primary_assembly 1: 190,597,638-190,616,809 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 3 transcripts (splice variants), 81 orthologues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000091065.3	Apobr-202	4013	1016aa	ENSRNOP00000074267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K7M4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000137001.1	Apobr-203	3209	1003aa	ENSRNOP00000103262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000023555.7	Apobr-201	1277	130aa	ENSRNOP00000023555.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I996 D4A7C9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,