Gene: Nfatc1 ENSRNOG00000017146

Description

nuclear factor of activated T-cells 1 [Source:RGD Symbol;Acc:2319357]

Gene Synonyms

LOC100361818

Location

Primary_assembly 18: 76,321,386-76,430,990 reverse strand.

GRCr8:CM070408.1

About this gene

This gene has 7 transcripts (splice variants), 262 orthologues, 4 paralogues and is associated with 18 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000154852.1	Nfatc1-206	4016	983aa	ENSRNOP00000108353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000058382.6	Nfatc1-201	4909	939aa	ENSRNOP00000055183.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZE20	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000090369.3	Nfatc1-202	4638	925aa	ENSRNOP00000070317.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JXL2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000169701.1	Nfatc1-207	4595	918aa	ENSRNOP00000107387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000137843.1	Nfatc1-205	4512	888aa	ENSRNOP00000099508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000128065.1	Nfatc1-203	2975	925aa	ENSRNOP00000098643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000129877.1	Nfatc1-204	2900	932aa	ENSRNOP00000112736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-