Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Otud1 ENSRNOG00000016950

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Description

OTU deubiquitinase 1 [Source:RGD Symbol;Acc:1563344]

Gene Synonyms

LOC498803, RGD1563344

Location

Primary_assembly 17: 87,149,175-87,330,706 forward strand.

GRCr8:CM070407.1

About this gene

This gene has 8 transcripts (splice variants), 154 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000126316.1	Otud1-204	10777	455aa	ENSRNOP00000105051.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000122856.1	Otud1-202	7098	455aa	ENSRNOP00000103015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000167480.1	Otud1-207	3619	455aa	ENSRNOP00000107406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000022734.7	Otud1-201	2750	455aa	ENSRNOP00000060310.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZNC0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000125847.1	Otud1-203	2693	455aa	ENSRNOP00000104841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000163386.1	Otud1-206	2595	455aa	ENSRNOP00000112413.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000168613.1	Otud1-208	1978	455aa	ENSRNOP00000101929.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000127288.1	Otud1-205	1847	455aa	ENSRNOP00000104137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data