Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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- Structural variants
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Pathway
Molecular interactions
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Gene: Wdr48 ENSRNOG00000016942

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Description

WD repeat domain 48 [Source:RGD Symbol;Acc:1309702]

Gene Synonyms

LOC363164, RGD1309702

Location

Primary_assembly 8: 128,499,716-128,532,930 forward strand.

GRCr8:CM070398.1

About this gene

This gene has 4 transcripts (splice variants), 229 orthologues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000114700.2	Wdr48-203	3859	691aa	ENSRNOP00000088537.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AA52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000127294.1	Wdr48-204	3955	669aa	ENSRNOP00000110943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000082356.3	Wdr48-202	3798	676aa	ENSRNOP00000075552.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KAW5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000024172.9	Wdr48-201	3744	665aa	ENSRNOP00000024172.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3Z8C7	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data