Gene: Hmg20a ENSRNOG00000016905

Description

high mobility group 20A [Source:RGD Symbol;Acc:1564760]

Gene Synonyms

LOC315689, RGD1564760

Location

Primary_assembly 8: 65,715,219-65,791,608 forward strand.

GRCr8:CM070398.1

About this gene

This gene has 3 transcripts (splice variants), 205 orthologues, 52 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000102284.2	Hmg20a-202	2228	350aa	ENSRNOP00000097847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ATE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000022976.7	Hmg20a-201	4054	347aa	ENSRNOP00000022976.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J4Q9 D3Z937	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000109498.2	Hmg20a-203	1050	101aa	ENSRNOP00000096808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMK9	-