Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Rpl3 ENSRNOG00000016896

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Description

ribosomal protein L3 [Source:RGD Symbol;Acc:735105]

Gene Synonyms

L4, MGC72934

Location

Primary_assembly 7: 113,501,960-113,507,990 reverse strand.

GRCr8:CM070397.1

About this gene

This gene has 5 transcripts (splice variants), 261 orthologues, 1 paralogue and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000154503.1	Rpl3-205	1319	419aa	ENSRNOP00000102360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000067032.5	Rpl3-201	1298	403aa	ENSRNOP00000060662.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QVY8 A6HSV4 P21531	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000146099.1	Rpl3-204	1238	383aa	ENSRNOP00000102061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000092252.3	Rpl3-203	1223	378aa	ENSRNOP00000075786.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0U1RRR9	-
ENSRNOT00000089407.3	Rpl3-202	1197	398aa	ENSRNOP00000069877.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R1Y6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data