Gene: Apobec3 ENSRNOG00000016852

Description

apolipoprotein B mRNA editing enzyme catalytic subunit 3 [Source:RGD Symbol;Acc:1307800]

Gene Synonyms

Apobec3b, Apobec3f, LOC315137, MGC124783

Location

Primary_assembly 7: 113,314,171-113,333,431 forward strand.

GRCr8:CM070397.1

About this gene

This gene has 3 transcripts (splice variants), 91 orthologues, 3 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000111377.2	Apobec3-203	1422	444aa	ENSRNOP00000095626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GL83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000037134.7	Apobec3-201	1906	396aa	ENSRNOP00000034183.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7EWS7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000101240.2	Apobec3-202	1392	434aa	ENSRNOP00000096800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQ44	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,