Gene: Lrrc56 ENSRNOG00000016697

Description

leucine rich repeat containing 56 [Source:RGD Symbol;Acc:1311654]

Gene Synonyms

LOC365389, MGC114503, RGD1311654

Location

Primary_assembly 1: 205,729,409-205,744,759 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 179 orthologues and is associated with 49 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000163683.1	Lrrc56-204	2639	548aa	ENSRNOP00000107955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HXQ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000091150.3	Lrrc56-202	2499	412aa	ENSRNOP00000074468.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K846	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000022867.8	Lrrc56-201	2103	523aa	ENSRNOP00000022867.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V8C9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000131070.1	Lrrc56-203	2004	499aa	ENSRNOP00000105619.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Lrrc56 ENSRNOG00000016697

Strains

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Gene: Lrrc56 ENSRNOG00000016697

Strains

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