Gene: Nsd1 ENSRNOG00000016680

Description

nuclear receptor binding SET domain protein 1 [Source:RGD Symbol;Acc:1307748]

Gene Synonyms

LOC306764

Location

Primary_assembly 17: 9,317,085-9,452,250 reverse strand.

GRCr8:CM070407.1

About this gene

This gene has 4 transcripts (splice variants), 305 orthologues, 21 paralogues and is associated with 27 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000118233.2	Nsd1-204	12733	2689aa	ENSRNOP00000094644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AMN8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000105851.2	Nsd1-202	12226	2586aa	ENSRNOP00000084557.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A1J6 A6KAU6	-
ENSRNOT00000107527.2	Nsd1-203	11945	2420aa	ENSRNOP00000077028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5YBL4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000060928.4	Nsd1-201	11834	2384aa	ENSRNOP00000057648.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4AA06	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,