Gene: Tnfrsf1b ENSRNOG00000016575

Description

TNF receptor superfamily member 1B [Source:RGD Symbol;Acc:621238]

Gene Synonyms

TNF-R2, TNF-RII, TNFR-II, Tnfr2, p75

Location

Primary_assembly 5: 162,353,848-162,387,411 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 4 transcripts (splice variants), 316 orthologues, 20 paralogues and is associated with 71 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000124636.1	Tnfrsf1b-204	1885	496aa	ENSRNOP00000102273.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000022478.6	Tnfrsf1b-201	5296	474aa	ENSRNOP00000022478.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IU15 Q80WY6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000119924.2	Tnfrsf1b-203	5284	470aa	ENSRNOP00000078858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZLM8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000103500.2	Tnfrsf1b-202	5167	431aa	ENSRNOP00000094197.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJ16	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Tnfrsf1b ENSRNOG00000016575

Strains

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Gene: Tnfrsf1b ENSRNOG00000016575

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