Gene: Plekhg4 ENSRNOG00000016479

Description

pleckstrin homology and RhoGEF domain containing G4 [Source:RGD Symbol;Acc:1310790]

Gene Synonyms

LOC307796, RGD1310790

Location

Primary_assembly 19: 50,159,754-50,182,133 forward strand.

GRCr8:CM070409.1

About this gene

This gene has 6 transcripts (splice variants), 206 orthologues, 22 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000104759.2	Plekhg4-203	4680	1273aa	ENSRNOP00000081851.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZTC9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000161025.1	Plekhg4-206	4389	1176aa	ENSRNOP00000105691.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000022439.8	Plekhg4-201	4322	1220aa	ENSRNOP00000022439.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZQ60	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000123433.1	Plekhg4-205	4317	1152aa	ENSRNOP00000102904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000111373.2	Plekhg4-204	4160	1207aa	ENSRNOP00000087289.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AG98	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000099933.2	Plekhg4-202	3680	1142aa	ENSRNOP00000076499.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y027	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,