Gene: Gtf3c1 ENSRNOG00000016218

Description

general transcription factor IIIC subunit 1 [Source:RGD Symbol;Acc:621048]

Gene Synonyms

LOC102554566

Location

Primary_assembly 1: 189,634,645-189,700,995 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 3 transcripts (splice variants), 217 orthologues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000099818.2	Gtf3c1-202	6433	2126aa	ENSRNOP00000097490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AWF1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000022271.8	Gtf3c1-201	6905	2102aa	ENSRNOP00000022271.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I922 F1LNV7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000136712.1	Gtf3c1-203	6842	2032aa	ENSRNOP00000100916.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-