Gene: Pdp1 ENSRNOG00000016180

Description

pyruvate dehydrogenase phosphatase catalytic subunit 1 [Source:RGD Symbol;Acc:620393]

Gene Synonyms

PDP 1, PDPC 1, Ppm2c

Location

Primary_assembly 5: 30,242,704-30,253,960 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues, 16 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000090579.3	Pdp1-203	2548	597aa	ENSRNOP00000069844.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JWE0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000090376.3	Pdp1-202	7085	538aa	ENSRNOP00000070525.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JY56 O88483	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000134828.1	Pdp1-204	2937	578aa	ENSRNOP00000108417.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000067823.5	Pdp1-201	2520	563aa	ENSRNOP00000062054.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2QC17 A6II75	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Pdp1 ENSRNOG00000016180

Strains

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Gene: Pdp1 ENSRNOG00000016180

Strains

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