Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
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Gene: Ckap5 ENSRNOG00000016067

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Description

cytoskeleton associated protein 5 [Source:RGD Symbol;Acc:1563596]

Gene Synonyms

LOC311191

Location

Primary_assembly 3: 97,947,031-98,049,049 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 4 transcripts (splice variants), 236 orthologues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000119801.2	Ckap5-204	7011	2040aa	ENSRNOP00000094312.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ALB1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000021837.10	Ckap5-201	6987	2032aa	ENSRNOP00000021837.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M949	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000102308.2	Ckap5-202	6945	2018aa	ENSRNOP00000077514.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5YCE4	-
ENSRNOT00000107972.2	Ckap5-203	6807	1972aa	ENSRNOP00000084840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GB38	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data