Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Fxn ENSRNOG00000015213

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Description

frataxin [Source:RGD Symbol;Acc:1565754]

Gene Synonyms

LOC499335, RGD1565754

Location

Primary_assembly 1: 231,300,150-231,323,989 reverse strand.

GRCr8:CM070391.1

About this gene

This gene has 3 transcripts (splice variants), 213 orthologues and is associated with 14 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000159616.1	Fxn-202	1333	263aa	ENSRNOP00000103464.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000170516.1	Fxn-203	1746	239aa	ENSRNOP00000105687.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000071614.4	Fxn-201	799	208aa	ENSRNOP00000066555.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0RAK4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data