Gene: Phc1 ENSRNOG00000015191

Description

polyhomeotic homolog 1 [Source:RGD Symbol;Acc:1309203]

Gene Synonyms

LOC312690

Location

Primary_assembly 4: 157,182,348-157,204,709 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 3 transcripts (splice variants), 194 orthologues, 17 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000097485.2	Phc1-202	4075	1045aa	ENSRNOP00000094390.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AHM8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000104598.2	Phc1-203	3919	993aa	ENSRNOP00000087501.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A4A7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000020529.7	Phc1-201	3917	1042aa	ENSRNOP00000020529.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6ILE3 D3ZVD1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,