siah E3 ubiquitin protein ligase 1 [Source:RGD Symbol;Acc:620449]
SIAH, Siah1a, siah-1, siah-1a
Primary_assembly 19: 36,540,947-36,581,541 forward strand.
GRCr8:CM070409.1
This gene has 9 transcripts (splice variants), 233 orthologues, 3 paralogues and is associated with 5 phenotypes.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSRNOT00000117078.2 | Siah1-205 | 2333 | 347aa | ENSRNOP00000088384.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8I6APD1 Q920M9 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENSRNOT00000169540.1 | Siah1-209 | 22667 | 282aa | ENSRNOP00000111435.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9UK92 | - |
| ENSRNOT00000155668.1 | Siah1-206 | 10144 | 282aa | ENSRNOP00000104306.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9UK92 | - |
| ENSRNOT00000156871.1 | Siah1-207 | 9619 | 282aa | ENSRNOP00000103855.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9UK92 | - |
| ENSRNOT00000167017.1 | Siah1-208 | 6880 | 282aa | ENSRNOP00000101118.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9UK92 | - |
| ENSRNOT00000111812.2 | Siah1-203 | 6466 | 282aa | ENSRNOP00000089183.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9UK92 Q920M9 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENSRNOT00000112896.2 | Siah1-204 | 6321 | 282aa | ENSRNOP00000092688.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9UK92 Q920M9 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENSRNOT00000097354.2 | Siah1-202 | 6078 | 282aa | ENSRNOP00000092754.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9UK92 Q920M9 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENSRNOT00000020329.8 | Siah1-201 | 2021 | 282aa | ENSRNOP00000020329.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A9UK92 Q920M9 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
