Gene: Pdpn ENSRNOG00000014961

Description

podoplanin [Source:RGD Symbol;Acc:61819]

Gene Synonyms

E11, Gp38, OTS-8, RTI140, RTI40, T1-alpha, T1A

Location

Primary_assembly 5: 160,884,993-160,925,637 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 5 transcripts (splice variants), 84 orthologues and is associated with 18 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000126855.1	Pdpn-204	1782	183aa	ENSRNOP00000104615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000020316.7	Pdpn-201	1852	166aa	ENSRNOP00000020316.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JSN8 A6ITZ5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000165434.1	Pdpn-205	1852	178aa	ENSRNOP00000109345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000111603.2	Pdpn-203	1813	153aa	ENSRNOP00000090610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AE24	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000093852.2	Pdpn-202	705	155aa	ENSRNOP00000096212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AUS3	-