Gene: Sympk ENSRNOG00000014353

Description

symplekin scaffold protein [Source:RGD Symbol;Acc:1306735]

Gene Synonyms

HNF-3G, Hfn3g, LOC292683

Location

Primary_assembly 1: 87,799,853-87,828,727 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 3 transcripts (splice variants), 197 orthologues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000084985.3	Sympk-202	4514	1398aa	ENSRNOP00000071808.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K1E5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000019814.9	Sympk-201	4171	1280aa	ENSRNOP00000019814.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LSH0	-
ENSRNOT00000094104.2	Sympk-203	4117	1262aa	ENSRNOP00000096286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ALH1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,