Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: AABR07026291.1 ENSRNOG00000014275

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Description

hook microtubule-tethering protein 3 [Source:RGD Symbol;Acc:1560960]

Location

Primary_assembly 16: 72,657,019-72,764,071 forward strand.

GRCr8:CM070406.1

About this gene

This gene has 5 transcripts (splice variants), 214 orthologues, 5 paralogues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000117895.2	AABR07026291.1-205	3387	725aa	ENSRNOP00000083319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZWS4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000097055.2	AABR07026291.1-202	4071	720aa	ENSRNOP00000091293.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQA0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000100260.2	AABR07026291.1-203	2293	694aa	ENSRNOP00000085710.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A0R7	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000019281.9	AABR07026291.1-201	2130	709aa	ENSRNOP00000019281.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7TQ77	-
ENSRNOT00000107751.2	AABR07026291.1-204	2112	703aa	ENSRNOP00000082084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZUA0	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data