Gene: Phactr1 ENSRNOG00000014264

Description

phosphatase and actin regulator 1 [Source:RGD Symbol;Acc:1303187]

Gene Synonyms

MGC112561

Location

Primary_assembly 17: 21,768,662-22,244,586 reverse strand.

GRCr8:CM070407.1

About this gene

This gene has 4 transcripts (splice variants), 299 orthologues, 3 paralogues and is associated with 24 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000106668.2	Phactr1-202	3121	649aa	ENSRNOP00000077447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5XW51 A6J754	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000107421.2	Phactr1-203	3103	643aa	ENSRNOP00000078261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZKJ8	-
ENSRNOT00000046523.6	Phactr1-201	2977	601aa	ENSRNOP00000043053.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LNB2	-
ENSRNOT00000110352.2	Phactr1-204	2914	580aa	ENSRNOP00000097958.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ATP4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,