Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: Ctsh ENSRNOG00000014064

.

Description

cathepsin H [Source:RGD Symbol;Acc:2447]

Location

Primary_assembly 8: 99,488,874-99,509,181 forward strand.

GRCr8:CM070398.1

About this gene

This gene has 2 transcripts (splice variants), 226 orthologues, 27 paralogues and is associated with 13 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000019285.7	Ctsh-201	1522	382aa	ENSRNOP00000019285.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHL6 P00786	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000080142.3	Ctsh-202	2913	333aa	ENSRNOP00000074611.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K8H6 A6I215	-

.

Strains

.

Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data