Gene: Ttc23 ENSRNOG00000013877

Description

tetratricopeptide repeat domain 23 [Source:RGD Symbol;Acc:1310409]

Gene Synonyms

LOC308708, MGC116076, RGD1310409

Location

Primary_assembly 1: 130,656,110-130,739,673 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 4 transcripts (splice variants), 149 orthologues, 1 paralogue and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000076227.4	Ttc23-203	2336	500aa	ENSRNOP00000067936.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MIZ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000073355.4	Ttc23-202	2689	475aa	ENSRNOP00000066210.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R9N4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000018639.8	Ttc23-201	2327	497aa	ENSRNOP00000018639.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LMW2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000078707.3	Ttc23-204	1981	484aa	ENSRNOP00000073911.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K6R3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Ttc23 ENSRNOG00000013877

Strains

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Gene: Ttc23 ENSRNOG00000013877

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