Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pgk2 ENSRNOG00000013600

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Description

phosphoglycerate kinase 2 [Source:RGD Symbol;Acc:1306627]

Gene Synonyms

LOC316265

Location

Primary_assembly 9: 27,973,459-28,079,866 forward strand.

GRCr8:CM070399.1

About this gene

This gene has 7 transcripts (splice variants), 203 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000161931.1	Pgk2-207	3446	417aa	ENSRNOP00000107539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZS38	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000018177.7	Pgk2-201	3346	417aa	ENSRNOP00000018177.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZS38 Q5XIV1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000129948.1	Pgk2-205	3322	417aa	ENSRNOP00000112138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZS38	-
ENSRNOT00000126040.1	Pgk2-204	3110	417aa	ENSRNOP00000112371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZS38	-
ENSRNOT00000112647.2	Pgk2-202	2724	417aa	ENSRNOP00000094932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZS38 Q5XIV1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000115954.2	Pgk2-203	2415	417aa	ENSRNOP00000081650.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZS38 Q5XIV1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000131484.1	Pgk2-206	1647	394aa	ENSRNOP00000102461.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data