Summary
- Splice variants
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Comparative Genomics
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Gene: Aaas ENSRNOG00000013445

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Description

aladin WD repeat nucleoporin [Source:RGD Symbol;Acc:1308701]

Gene Synonyms

LOC300259

Location

Primary_assembly 7: 135,342,901-135,362,545 reverse strand.

GRCr8:CM070397.1

About this gene

This gene has 5 transcripts (splice variants), 203 orthologues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000146313.1	Aaas-205	1965	564aa	ENSRNOP00000102972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000018809.8	Aaas-201	1911	546aa	ENSRNOP00000018808.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KCU9 D3ZNS8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000096778.2	Aaas-202	1911	546aa	ENSRNOP00000077779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5YCH6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000116335.2	Aaas-203	1875	534aa	ENSRNOP00000088974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJW8	-
ENSRNOT00000126788.1	Aaas-204	1744	502aa	ENSRNOP00000100285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data