Gene: Prkcsh ENSRNOG00000013360

Description

PRKCSH beta subunit of glucosidase II [Source:RGD Symbol;Acc:1309628]

Gene Synonyms

LOC300445

Location

Primary_assembly 8: 28,810,889-28,822,503 forward strand.

GRCr8:CM070398.1

About this gene

This gene has 4 transcripts (splice variants), 186 orthologues and is associated with 11 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000103948.2	Prkcsh-203	2127	525aa	ENSRNOP00000086800.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ADW9 F7EM53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000095656.2	Prkcsh-202	2103	517aa	ENSRNOP00000081881.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G8K5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000018009.8	Prkcsh-201	2017	518aa	ENSRNOP00000018009.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1WC34	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000166669.1	Prkcsh-204	1952	500aa	ENSRNOP00000101711.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Prkcsh ENSRNOG00000013360

Strains

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Gene: Prkcsh ENSRNOG00000013360

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