Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Rbbp6 ENSRNOG00000012806

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Description

RB binding protein 6, ubiquitin ligase [Source:RGD Symbol;Acc:1311964]

Gene Synonyms

LOC308968

Location

Primary_assembly 1: 186,934,938-186,966,852 forward strand.

GRCr8:CM070391.1

About this gene

This gene has 3 transcripts (splice variants), 142 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000146812.1	Rbbp6-203	6143	1827aa	ENSRNOP00000109263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000102275.2	Rbbp6-202	6041	1793aa	ENSRNOP00000092613.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AI92	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000035770.8	Rbbp6-201	6029	1789aa	ENSRNOP00000036139.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I8X8 G3V953	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data