Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Lrit1 ENSRNOG00000012790

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Description

leucine-rich repeat, Ig-like and transmembrane domains 1 [Source:RGD Symbol;Acc:628607]

Gene Synonyms

Lrrc21, Pal

Location

Primary_assembly 16: 12,842,339-12,852,035 forward strand.

GRCr8:CM070406.1

About this gene

This gene has 1 transcript (splice variant), 271 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000017773.4	Lrit1-201	4058	623aa	ENSRNOP00000017773.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHK6 A6K9I9 Q9JMH2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data