Gene: Nfya ENSRNOG00000012702

Description

nuclear transcription factor Y subunit alpha [Source:RGD Symbol;Acc:70976]

Gene Synonyms

CBF-A, CBF-B, NF-YA

Location

Primary_assembly 9: 20,085,073-20,111,504 forward strand.

GRCr8:CM070399.1

About this gene

This gene has 4 transcripts (splice variants), 236 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000125437.1	Nfya-204	3734	347aa	ENSRNOP00000112249.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000115817.2	Nfya-203	3545	346aa	ENSRNOP00000078156.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y9Y4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000091532.3	Nfya-202	3457	318aa	ENSRNOP00000075707.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KB97	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000017157.9	Nfya-201	1032	343aa	ENSRNOP00000017157.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q8B5	-