Summary
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Comparative Genomics
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Gene: Nup58 ENSRNOG00000012644

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Description

nucleoporin 58 [Source:RGD Symbol;Acc:631334]

Gene Synonyms

Nup45, Nupl1, p58/p45

Location

Primary_assembly 15: 38,533,614-38,583,178 reverse strand.

GRCr8:CM070405.1

About this gene

This gene has 5 transcripts (splice variants) and 213 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000095956.2	Nup58-203	3748	585aa	ENSRNOP00000084647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P70581-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000101273.2	Nup58-204	3727	578aa	ENSRNOP00000078538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G353	-
ENSRNOT00000017204.9	Nup58-201	2770	556aa	ENSRNOP00000017204.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q9I5 A6K693	-
ENSRNOT00000063943.4	Nup58-202	1707	513aa	ENSRNOP00000063452.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P70581-2	-
ENSRNOT00000132958.1	Nup58-205	980	208aa	ENSRNOP00000110527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data