Gene: Skap2 ENSRNOG00000012228

Description

src kinase associated phosphoprotein 2 [Source:RGD Symbol;Acc:620159]

Gene Synonyms

Scap2, Scap55r

Location

Primary_assembly 4: 82,263,709-82,432,886 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 5 transcripts (splice variants), 202 orthologues, 1 paralogue and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000154475.1	Skap2-205	1616	372aa	ENSRNOP00000100766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000016608.4	Skap2-201	1751	351aa	ENSRNOP00000016608.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q920G0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000142819.1	Skap2-204	1694	345aa	ENSRNOP00000103236.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000106495.2	Skap2-203	1625	357aa	ENSRNOP00000085492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A1S5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000097980.2	Skap2-202	1413	331aa	ENSRNOP00000097359.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ASS8	-