Gene: Nfatc2 ENSRNOG00000012175

Description

nuclear factor of activated T-cells 2 [Source:RGD Symbol;Acc:1307690]

Gene Synonyms

LOC311658

Location

Primary_assembly 3: 177,618,314-177,747,380 reverse strand.

GRCr8:CM070393.1

About this gene

This gene has 4 transcripts (splice variants), 273 orthologues, 4 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000065615.3	Nfatc2-201	3815	930aa	ENSRNOP00000059260.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A0I8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000102500.2	Nfatc2-202	3756	911aa	ENSRNOP00000078664.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZLE7 A6JXP9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000103552.2	Nfatc2-203	3165	654aa	ENSRNOP00000082665.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G9R9	-
ENSRNOT00000110172.2	Nfatc2-204	3024	926aa	ENSRNOP00000086352.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A3G2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,