Summary
- Splice variants
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Genetic Variation
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Gene: Unc5d ENSRNOG00000011858

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Description

unc-5 netrin receptor D [Source:RGD Symbol;Acc:1309245]

Gene Synonyms

LOC306534

Location

Primary_assembly 16: 69,563,212-70,104,078 forward strand.

GRCr8:CM070406.1

About this gene

This gene has 5 transcripts (splice variants), 278 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000111680.2	Unc5d-203	3256	956aa	ENSRNOP00000077568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LW30	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000085659.3	Unc5d-202	3241	951aa	ENSRNOP00000075244.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KA37	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000125236.1	Unc5d-205	3208	940aa	ENSRNOP00000100052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000123536.1	Unc5d-204	3073	895aa	ENSRNOP00000104754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000015879.9	Unc5d-201	2949	920aa	ENSRNOP00000015879.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R3P9D5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data