Summary
- Splice variants
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Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
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Phenotypes
Genetic Variation
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Gene: Spag5 ENSRNOG00000011777

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Description

sperm associated antigen 5 [Source:RGD Symbol;Acc:620152]

Location

Primary_assembly 10: 63,696,466-63,714,811 forward strand.

GRCr8:CM070400.1

About this gene

This gene has 2 transcripts (splice variants), 126 orthologues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000015651.9	Spag5-201	4231	1187aa	ENSRNOP00000015651.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GUU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000106403.2	Spag5-202	3796	1156aa	ENSRNOP00000085975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A4Y3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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