Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Rab3c ENSRNOG00000011623

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Description

RAB3C, member RAS oncogene family [Source:RGD Symbol;Acc:620923]

Location

Primary_assembly 2: 43,361,093-43,577,022 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 5 transcripts (splice variants), 222 orthologues, 64 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000170596.1	Rab3c-205	1111	227aa	ENSRNOP00000104946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I5M2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000015871.8	Rab3c-201	1105	225aa	ENSRNOP00000015871.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q7P7 A6I5M1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000116600.2	Rab3c-203	997	227aa	ENSRNOP00000096986.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6I5M2 P62824	-
ENSRNOT00000086851.3	Rab3c-202	894	221aa	ENSRNOP00000073277.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R781	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000118628.2	Rab3c-204	595	169aa	ENSRNOP00000094469.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AM94	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data