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Gene: Prxl2a ENSRNOG00000011140

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Description

peroxiredoxin like 2A [Source:RGD Symbol;Acc:1309676]

Gene Synonyms

Fam213a, LOC361118, PAMM, RGD1309676

Location

Primary_assembly 16: 16,900,699-16,920,561 reverse strand.

GRCr8:CM070406.1

About this gene

This gene has 3 transcripts (splice variants) and 97 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000014819.7	Prxl2a-201	1590	239aa	ENSRNOP00000014819.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q6Y2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000158328.1	Prxl2a-203	1498	225aa	ENSRNOP00000102558.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K9L0	-
ENSRNOT00000113272.2	Prxl2a-202	1382	236aa	ENSRNOP00000078597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G216	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data