Gene: Trpc4 ENSRNOG00000011133

Description

transient receptor potential cation channel, subfamily C, member 4 [Source:RGD Symbol;Acc:621276]

Gene Synonyms

CCE1, Trp4, Trrp4

Location

Primary_assembly 2: 140,458,296-140,626,969 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 3 transcripts (splice variants), 278 orthologues, 6 paralogues and is associated with 6 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000044028.5	Trpc4-202	3470	977aa	ENSRNOP00000042886.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7FEC4 Q91ZM1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000101369.2	Trpc4-203	3428	963aa	ENSRNOP00000094229.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6APN9	-
ENSRNOT00000015437.7	Trpc4-201	2875	893aa	ENSRNOP00000015437.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JVB2 F7F3R3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,