Summary
- Splice variants
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Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Gene: Tmem154 ENSRNOG00000010866

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Description

transmembrane protein 154 [Source:RGD Symbol;Acc:1563262]

Gene Synonyms

LOC361972, RGD1563262

Location

Primary_assembly 2: 172,313,240-172,361,723 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 3 transcripts (splice variants) and 110 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000117042.2	Tmem154-202	703	193aa	ENSRNOP00000087915.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A9P5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000157330.1	Tmem154-203	3978	180aa	ENSRNOP00000107033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J5X2	-
ENSRNOT00000014433.7	Tmem154-201	3043	167aa	ENSRNOP00000014433.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J5X3 D4ABU1	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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