Gene: Ube3d ENSRNOG00000010802

Description

ubiquitin protein ligase E3D [Source:RGD Symbol;Acc:1306773]

Gene Synonyms

LOC315863, MGC124836, RGD1306773, Ube2cbp

Location

Primary_assembly 8: 95,882,167-96,293,078 reverse strand.

GRCr8:CM070398.1

About this gene

This gene has 7 transcripts (splice variants), 196 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000080195.3	Ube3d-202	1238	372aa	ENSRNOP00000071165.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JZS6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000014600.7	Ube3d-201	1850	370aa	ENSRNOP00000014600.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3T1H6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000134165.1	Ube3d-204	1668	368aa	ENSRNOP00000110873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000158425.1	Ube3d-206	1266	349aa	ENSRNOP00000105339.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000148030.1	Ube3d-205	1263	363aa	ENSRNOP00000111592.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000121867.1	Ube3d-203	627	150aa	ENSRNOP00000106647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000163675.1	Ube3d-207	615	174aa	ENSRNOP00000100624.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-