Gene: Celf1 ENSRNOG00000010379

Description

CUGBP, Elav-like family member 1 [Source:RGD Symbol;Acc:1307721]

Gene Synonyms

CELF-1, CUG-BP1, Cugbp1, LOC362160

Location

Primary_assembly 3: 97,380,424-97,452,791 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 4 transcripts (splice variants), 221 orthologues, 6 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000109347.2	Celf1-203	3499	514aa	ENSRNOP00000094511.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AL51	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000014484.9	Celf1-201	3480	510aa	ENSRNOP00000014484.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q6U8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000151133.1	Celf1-204	3423	486aa	ENSRNOP00000111254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HN97	-
ENSRNOT00000106910.2	Celf1-202	2002	487aa	ENSRNOP00000080849.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZTX3 Q4QQT3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,