Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Efnb3 ENSRNOG00000010320

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Description

ephrin B3 [Source:RGD Symbol;Acc:2541]

Gene Synonyms

ELK-L3, LOC360546, RGD1565678

Location

Primary_assembly 10: 54,773,282-54,797,651 reverse strand.

GRCr8:CM070400.1

About this gene

This gene has 5 transcripts (splice variants), 188 orthologues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000014261.7	Efnb3-202	2485	515aa	ENSRNOP00000014261.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XII5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000013955.8	Efnb3-201	3114	340aa	ENSRNOP00000013956.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HFR3 G3V7D4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000131536.1	Efnb3-204	2960	337aa	ENSRNOP00000107389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000163827.1	Efnb3-205	2951	334aa	ENSRNOP00000103504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000131403.1	Efnb3-203	2924	372aa	ENSRNOP00000111775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data