Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
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ID History
- Gene history

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Gene: Smc4 ENSRNOG00000010274

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Description

structural maintenance of chromosomes 4 [Source:RGD Symbol;Acc:1306680]

Gene Synonyms

LOC295107, MGC125078, Smc4l1

Location

Primary_assembly 2: 155,550,262-155,581,937 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 3 transcripts (splice variants), 211 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000118419.2	Smc4-203	4241	1286aa	ENSRNOP00000079265.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMN6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000112113.2	Smc4-202	5076	1251aa	ENSRNOP00000093203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GK63	-
ENSRNOT00000013931.7	Smc4-201	4088	1235aa	ENSRNOP00000013931.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MAD9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data