Gene: Trim2 ENSRNOG00000010124

Description

tripartite motif-containing 2 [Source:RGD Symbol;Acc:1310981]

Gene Synonyms

LOC361970

Location

Primary_assembly 2: 171,798,660-171,913,468 reverse strand.

GRCr8:CM070392.1

About this gene

This gene has 3 transcripts (splice variants), 202 orthologues, 62 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000107931.2	Trim2-203	7018	805aa	ENSRNOP00000082573.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZV62 A0A8I5ZY23	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000067618.4	Trim2-201	6929	765aa	ENSRNOP00000060362.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZM62	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000085382.3	Trim2-202	6837	770aa	ENSRNOP00000072306.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K2M8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,