Gene: Rapgef6 ENSRNOG00000009995

Description

Rap guanine nucleotide exchange factor 6 [Source:RGD Symbol;Acc:1307645]

Gene Synonyms

LOC303141

Location

Primary_assembly 10: 39,156,620-39,324,946 forward strand.

GRCr8:CM070400.1

About this gene

This gene has 5 transcripts (splice variants), 207 orthologues, 35 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000110844.2	Rapgef6-204	8170	1614aa	ENSRNOP00000090946.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ADK8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000099767.2	Rapgef6-201	8161	1611aa	ENSRNOP00000090336.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GIT4 D3ZTL8	-
ENSRNOT00000113485.2	Rapgef6-205	7805	1511aa	ENSRNOP00000094611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AM01	-
ENSRNOT00000109709.2	Rapgef6-203	5707	1513aa	ENSRNOP00000096908.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GLT7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000102938.2	Rapgef6-202	4647	1416aa	ENSRNOP00000078181.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5YCN5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,